# Makefile.in generated by automake 1.7.9 from Makefile.am. # @configure_input@ # Copyright 1994, 1995, 1996, 1997, 1998, 1999, 2000, 2001, 2002, 2003 # Free Software Foundation, Inc. # This Makefile.in is free software; the Free Software Foundation # gives unlimited permission to copy and/or distribute it, # with or without modifications, as long as this notice is preserved. # This program is distributed in the hope that it will be useful, # but WITHOUT ANY WARRANTY, to the extent permitted by law; without # even the implied warranty of MERCHANTABILITY or FITNESS FOR A # PARTICULAR PURPOSE. @SET_MAKE@ srcdir = @srcdir@ top_srcdir = @top_srcdir@ VPATH = @srcdir@ pkgdatadir = $(datadir)/@PACKAGE@ pkglibdir = $(libdir)/@PACKAGE@ pkgincludedir = $(includedir)/@PACKAGE@ top_builddir = .. am__cd = CDPATH="$${ZSH_VERSION+.}$(PATH_SEPARATOR)" && cd INSTALL = @INSTALL@ install_sh_DATA = $(install_sh) -c -m 644 install_sh_PROGRAM = $(install_sh) -c install_sh_SCRIPT = $(install_sh) -c INSTALL_HEADER = $(INSTALL_DATA) transform = $(program_transform_name) NORMAL_INSTALL = : PRE_INSTALL = : POST_INSTALL = : NORMAL_UNINSTALL = : PRE_UNINSTALL = : POST_UNINSTALL = : host_triplet = @host@ ACLOCAL = @ACLOCAL@ AMDEP_FALSE = @AMDEP_FALSE@ AMDEP_TRUE = @AMDEP_TRUE@ AMTAR = @AMTAR@ AR = @AR@ AUTOCONF = @AUTOCONF@ AUTOHEADER = @AUTOHEADER@ AUTOMAKE = @AUTOMAKE@ AWK = @AWK@ CC = @CC@ CCDEPMODE = @CCDEPMODE@ CFLAGS = @CFLAGS@ CPP = @CPP@ CPPFLAGS = @CPPFLAGS@ CXX = @CXX@ CXXCPP = @CXXCPP@ CXXDEPMODE = @CXXDEPMODE@ CXXFLAGS = @CXXFLAGS@ CYGPATH_W = @CYGPATH_W@ DEFS = @DEFS@ DEPDIR = @DEPDIR@ ECHO = @ECHO@ ECHO_C = @ECHO_C@ ECHO_N = @ECHO_N@ ECHO_T = @ECHO_T@ EGREP = @EGREP@ EXEEXT = @EXEEXT@ F77 = @F77@ FFLAGS = @FFLAGS@ GREP = @GREP@ INSTALL_DATA = @INSTALL_DATA@ INSTALL_PROGRAM = @INSTALL_PROGRAM@ INSTALL_SCRIPT = @INSTALL_SCRIPT@ INSTALL_STRIP_PROGRAM = @INSTALL_STRIP_PROGRAM@ LDFLAGS = @LDFLAGS@ LIBOBJS = @LIBOBJS@ LIBS = @LIBS@ LIBTOOL = @LIBTOOL@ LN_S = @LN_S@ LTLIBOBJS = @LTLIBOBJS@ MAKEINFO = @MAKEINFO@ OBJEXT = @OBJEXT@ PACKAGE = @PACKAGE@ PACKAGE_BUGREPORT = @PACKAGE_BUGREPORT@ PACKAGE_NAME = @PACKAGE_NAME@ PACKAGE_STRING = @PACKAGE_STRING@ PACKAGE_TARNAME = @PACKAGE_TARNAME@ PACKAGE_VERSION = @PACKAGE_VERSION@ PATH_SEPARATOR = @PATH_SEPARATOR@ POW_LIB = @POW_LIB@ RANLIB = @RANLIB@ SED = @SED@ SET_MAKE = @SET_MAKE@ SHELL = @SHELL@ STRIP = @STRIP@ VERSION = @VERSION@ ac_ct_CC = @ac_ct_CC@ ac_ct_CXX = @ac_ct_CXX@ ac_ct_F77 = @ac_ct_F77@ am__fastdepCC_FALSE = @am__fastdepCC_FALSE@ am__fastdepCC_TRUE = @am__fastdepCC_TRUE@ am__fastdepCXX_FALSE = @am__fastdepCXX_FALSE@ am__fastdepCXX_TRUE = @am__fastdepCXX_TRUE@ am__include = @am__include@ am__leading_dot = @am__leading_dot@ am__quote = @am__quote@ bindir = @bindir@ build = @build@ build_alias = @build_alias@ build_cpu = @build_cpu@ build_os = @build_os@ build_vendor = @build_vendor@ datadir = @datadir@ datarootdir = @datarootdir@ docdir = @docdir@ dvidir = @dvidir@ exec_prefix = @exec_prefix@ host = @host@ host_alias = @host_alias@ host_cpu = @host_cpu@ host_os = @host_os@ host_vendor = @host_vendor@ htmldir = @htmldir@ includedir = @includedir@ infodir = @infodir@ install_sh = @install_sh@ libdir = @libdir@ libexecdir = @libexecdir@ localedir = @localedir@ localstatedir = @localstatedir@ mandir = @mandir@ oldincludedir = @oldincludedir@ pdfdir = @pdfdir@ prefix = @prefix@ program_transform_name = @program_transform_name@ psdir = @psdir@ sbindir = @sbindir@ sharedstatedir = @sharedstatedir@ sysconfdir = @sysconfdir@ target_alias = @target_alias@ bin_PROGRAMS = HelixTips find-h-bonds VDWCont1to2 LDADD = ../src-lib/libproteingeometry.la AM_LDFLAGS = -lm AM_CFLAGS = -g HelixTips_SOURCES = HelixTips.main.c find_h_bonds_SOURCES = find-h-bonds.main.c NCube.c NCube.h SetupCube.c VDWCont1to2_SOURCES = VDWCont1to2.main.c WaterHbonds.c WaterHbonds.h subdir = src-prog2 ACLOCAL_M4 = $(top_srcdir)/aclocal.m4 mkinstalldirs = $(SHELL) $(top_srcdir)/mkinstalldirs CONFIG_CLEAN_FILES = bin_PROGRAMS = HelixTips$(EXEEXT) find-h-bonds$(EXEEXT) \ VDWCont1to2$(EXEEXT) PROGRAMS = $(bin_PROGRAMS) am_HelixTips_OBJECTS = HelixTips.main.$(OBJEXT) HelixTips_OBJECTS = $(am_HelixTips_OBJECTS) HelixTips_LDADD = $(LDADD) HelixTips_DEPENDENCIES = ../src-lib/libproteingeometry.la HelixTips_LDFLAGS = am_VDWCont1to2_OBJECTS = VDWCont1to2.main.$(OBJEXT) \ WaterHbonds.$(OBJEXT) VDWCont1to2_OBJECTS = $(am_VDWCont1to2_OBJECTS) VDWCont1to2_LDADD = $(LDADD) VDWCont1to2_DEPENDENCIES = ../src-lib/libproteingeometry.la VDWCont1to2_LDFLAGS = am_find_h_bonds_OBJECTS = find-h-bonds.main.$(OBJEXT) NCube.$(OBJEXT) \ SetupCube.$(OBJEXT) find_h_bonds_OBJECTS = $(am_find_h_bonds_OBJECTS) find_h_bonds_LDADD = $(LDADD) find_h_bonds_DEPENDENCIES = ../src-lib/libproteingeometry.la find_h_bonds_LDFLAGS = DEFAULT_INCLUDES = -I. -I$(srcdir) depcomp = $(SHELL) $(top_srcdir)/depcomp am__depfiles_maybe = depfiles @AMDEP_TRUE@DEP_FILES = ./$(DEPDIR)/HelixTips.main.Po \ @AMDEP_TRUE@ ./$(DEPDIR)/NCube.Po ./$(DEPDIR)/SetupCube.Po \ @AMDEP_TRUE@ ./$(DEPDIR)/VDWCont1to2.main.Po \ @AMDEP_TRUE@ ./$(DEPDIR)/WaterHbonds.Po \ @AMDEP_TRUE@ ./$(DEPDIR)/find-h-bonds.main.Po COMPILE = $(CC) $(DEFS) $(DEFAULT_INCLUDES) $(INCLUDES) $(AM_CPPFLAGS) \ $(CPPFLAGS) $(AM_CFLAGS) $(CFLAGS) LTCOMPILE = $(LIBTOOL) --mode=compile $(CC) $(DEFS) $(DEFAULT_INCLUDES) \ $(INCLUDES) $(AM_CPPFLAGS) $(CPPFLAGS) $(AM_CFLAGS) $(CFLAGS) CCLD = $(CC) LINK = $(LIBTOOL) --mode=link $(CCLD) $(AM_CFLAGS) $(CFLAGS) \ $(AM_LDFLAGS) $(LDFLAGS) -o $@ DIST_SOURCES = $(HelixTips_SOURCES) $(VDWCont1to2_SOURCES) \ $(find_h_bonds_SOURCES) DIST_COMMON = $(srcdir)/Makefile.in Makefile.am SOURCES = $(HelixTips_SOURCES) $(VDWCont1to2_SOURCES) $(find_h_bonds_SOURCES) all: all-am .SUFFIXES: .SUFFIXES: .c .lo .o .obj $(srcdir)/Makefile.in: Makefile.am $(top_srcdir)/configure.ac $(ACLOCAL_M4) cd $(top_srcdir) && \ $(AUTOMAKE) --gnu src-prog2/Makefile Makefile: $(srcdir)/Makefile.in $(top_builddir)/config.status cd $(top_builddir) && $(SHELL) ./config.status $(subdir)/$@ $(am__depfiles_maybe) binPROGRAMS_INSTALL = $(INSTALL_PROGRAM) install-binPROGRAMS: $(bin_PROGRAMS) @$(NORMAL_INSTALL) $(mkinstalldirs) $(DESTDIR)$(bindir) @list='$(bin_PROGRAMS)'; for p in $$list; do \ p1=`echo $$p|sed 's/$(EXEEXT)$$//'`; \ if test -f $$p \ || test -f $$p1 \ ; then \ f=`echo "$$p1" | sed 's,^.*/,,;$(transform);s/$$/$(EXEEXT)/'`; \ echo " $(INSTALL_PROGRAM_ENV) $(LIBTOOL) --mode=install $(binPROGRAMS_INSTALL) $$p $(DESTDIR)$(bindir)/$$f"; \ $(INSTALL_PROGRAM_ENV) $(LIBTOOL) --mode=install $(binPROGRAMS_INSTALL) $$p $(DESTDIR)$(bindir)/$$f || exit 1; \ else :; fi; \ done uninstall-binPROGRAMS: @$(NORMAL_UNINSTALL) @list='$(bin_PROGRAMS)'; for p in $$list; do \ f=`echo "$$p" | sed 's,^.*/,,;s/$(EXEEXT)$$//;$(transform);s/$$/$(EXEEXT)/'`; \ echo " rm -f $(DESTDIR)$(bindir)/$$f"; \ rm -f $(DESTDIR)$(bindir)/$$f; \ done clean-binPROGRAMS: @list='$(bin_PROGRAMS)'; for p in $$list; do \ f=`echo $$p|sed 's/$(EXEEXT)$$//'`; \ echo " rm -f $$p $$f"; \ rm -f $$p $$f ; \ done HelixTips$(EXEEXT): $(HelixTips_OBJECTS) $(HelixTips_DEPENDENCIES) @rm -f HelixTips$(EXEEXT) $(LINK) $(HelixTips_LDFLAGS) $(HelixTips_OBJECTS) $(HelixTips_LDADD) $(LIBS) VDWCont1to2$(EXEEXT): $(VDWCont1to2_OBJECTS) $(VDWCont1to2_DEPENDENCIES) @rm -f VDWCont1to2$(EXEEXT) $(LINK) $(VDWCont1to2_LDFLAGS) $(VDWCont1to2_OBJECTS) $(VDWCont1to2_LDADD) $(LIBS) find-h-bonds$(EXEEXT): $(find_h_bonds_OBJECTS) $(find_h_bonds_DEPENDENCIES) @rm -f find-h-bonds$(EXEEXT) $(LINK) $(find_h_bonds_LDFLAGS) $(find_h_bonds_OBJECTS) $(find_h_bonds_LDADD) $(LIBS) mostlyclean-compile: -rm -f *.$(OBJEXT) core *.core distclean-compile: -rm -f *.tab.c @AMDEP_TRUE@@am__include@ @am__quote@./$(DEPDIR)/HelixTips.main.Po@am__quote@ @AMDEP_TRUE@@am__include@ @am__quote@./$(DEPDIR)/NCube.Po@am__quote@ @AMDEP_TRUE@@am__include@ @am__quote@./$(DEPDIR)/SetupCube.Po@am__quote@ @AMDEP_TRUE@@am__include@ @am__quote@./$(DEPDIR)/VDWCont1to2.main.Po@am__quote@ @AMDEP_TRUE@@am__include@ @am__quote@./$(DEPDIR)/WaterHbonds.Po@am__quote@ @AMDEP_TRUE@@am__include@ @am__quote@./$(DEPDIR)/find-h-bonds.main.Po@am__quote@ .c.o: @am__fastdepCC_TRUE@ if $(COMPILE) -MT $@ -MD -MP -MF "$(DEPDIR)/$*.Tpo" \ @am__fastdepCC_TRUE@ -c -o $@ `test -f '$<' || echo '$(srcdir)/'`$<; \ @am__fastdepCC_TRUE@ then mv -f "$(DEPDIR)/$*.Tpo" "$(DEPDIR)/$*.Po"; \ @am__fastdepCC_TRUE@ else rm -f "$(DEPDIR)/$*.Tpo"; exit 1; \ @am__fastdepCC_TRUE@ fi @AMDEP_TRUE@@am__fastdepCC_FALSE@ source='$<' object='$@' libtool=no @AMDEPBACKSLASH@ @AMDEP_TRUE@@am__fastdepCC_FALSE@ depfile='$(DEPDIR)/$*.Po' tmpdepfile='$(DEPDIR)/$*.TPo' @AMDEPBACKSLASH@ @AMDEP_TRUE@@am__fastdepCC_FALSE@ $(CCDEPMODE) $(depcomp) @AMDEPBACKSLASH@ @am__fastdepCC_FALSE@ $(COMPILE) -c `test -f '$<' || echo '$(srcdir)/'`$< .c.obj: @am__fastdepCC_TRUE@ if $(COMPILE) -MT $@ -MD -MP -MF "$(DEPDIR)/$*.Tpo" \ @am__fastdepCC_TRUE@ -c -o $@ `if test -f '$<'; then $(CYGPATH_W) '$<'; else $(CYGPATH_W) '$(srcdir)/$<'; fi`; \ @am__fastdepCC_TRUE@ then mv -f "$(DEPDIR)/$*.Tpo" "$(DEPDIR)/$*.Po"; \ @am__fastdepCC_TRUE@ else rm -f "$(DEPDIR)/$*.Tpo"; exit 1; \ @am__fastdepCC_TRUE@ fi @AMDEP_TRUE@@am__fastdepCC_FALSE@ source='$<' object='$@' libtool=no @AMDEPBACKSLASH@ @AMDEP_TRUE@@am__fastdepCC_FALSE@ depfile='$(DEPDIR)/$*.Po' tmpdepfile='$(DEPDIR)/$*.TPo' @AMDEPBACKSLASH@ @AMDEP_TRUE@@am__fastdepCC_FALSE@ $(CCDEPMODE) $(depcomp) @AMDEPBACKSLASH@ @am__fastdepCC_FALSE@ $(COMPILE) -c `if test -f '$<'; then $(CYGPATH_W) '$<'; else $(CYGPATH_W) '$(srcdir)/$<'; fi` .c.lo: @am__fastdepCC_TRUE@ if $(LTCOMPILE) -MT $@ -MD -MP -MF "$(DEPDIR)/$*.Tpo" \ @am__fastdepCC_TRUE@ -c -o $@ `test -f '$<' || echo '$(srcdir)/'`$<; \ @am__fastdepCC_TRUE@ then mv -f "$(DEPDIR)/$*.Tpo" "$(DEPDIR)/$*.Plo"; \ @am__fastdepCC_TRUE@ else rm -f "$(DEPDIR)/$*.Tpo"; exit 1; \ @am__fastdepCC_TRUE@ fi @AMDEP_TRUE@@am__fastdepCC_FALSE@ source='$<' object='$@' libtool=yes @AMDEPBACKSLASH@ @AMDEP_TRUE@@am__fastdepCC_FALSE@ depfile='$(DEPDIR)/$*.Plo' tmpdepfile='$(DEPDIR)/$*.TPlo' @AMDEPBACKSLASH@ @AMDEP_TRUE@@am__fastdepCC_FALSE@ $(CCDEPMODE) $(depcomp) @AMDEPBACKSLASH@ @am__fastdepCC_FALSE@ $(LTCOMPILE) -c -o $@ `test -f '$<' || echo '$(srcdir)/'`$< mostlyclean-libtool: -rm -f *.lo clean-libtool: -rm -rf .libs _libs distclean-libtool: -rm -f libtool uninstall-info-am: ETAGS = etags ETAGSFLAGS = CTAGS = ctags CTAGSFLAGS = tags: TAGS ID: $(HEADERS) $(SOURCES) $(LISP) $(TAGS_FILES) list='$(SOURCES) $(HEADERS) $(LISP) $(TAGS_FILES)'; \ unique=`for i in $$list; do \ if test -f "$$i"; then echo $$i; else echo $(srcdir)/$$i; fi; \ done | \ $(AWK) ' { files[$$0] = 1; } \ END { for (i in files) print i; }'`; \ mkid -fID $$unique TAGS: $(HEADERS) $(SOURCES) $(TAGS_DEPENDENCIES) \ $(TAGS_FILES) $(LISP) tags=; \ here=`pwd`; \ list='$(SOURCES) $(HEADERS) $(LISP) $(TAGS_FILES)'; \ unique=`for i in $$list; do \ if test -f "$$i"; then echo $$i; else echo $(srcdir)/$$i; fi; \ done | \ $(AWK) ' { files[$$0] = 1; } \ END { for (i in files) print i; }'`; \ test -z "$(ETAGS_ARGS)$$tags$$unique" \ || $(ETAGS) $(ETAGSFLAGS) $(AM_ETAGSFLAGS) $(ETAGS_ARGS) \ $$tags $$unique ctags: CTAGS CTAGS: $(HEADERS) $(SOURCES) $(TAGS_DEPENDENCIES) \ $(TAGS_FILES) $(LISP) tags=; \ here=`pwd`; \ list='$(SOURCES) $(HEADERS) $(LISP) $(TAGS_FILES)'; \ unique=`for i in $$list; do \ if test -f "$$i"; then echo $$i; else echo $(srcdir)/$$i; fi; \ done | \ $(AWK) ' { files[$$0] = 1; } \ END { for (i in files) print i; }'`; \ test -z "$(CTAGS_ARGS)$$tags$$unique" \ || $(CTAGS) $(CTAGSFLAGS) $(AM_CTAGSFLAGS) $(CTAGS_ARGS) \ $$tags $$unique GTAGS: here=`$(am__cd) $(top_builddir) && pwd` \ && cd $(top_srcdir) \ && gtags -i $(GTAGS_ARGS) $$here distclean-tags: -rm -f TAGS ID GTAGS GRTAGS GSYMS GPATH tags DISTFILES = $(DIST_COMMON) $(DIST_SOURCES) $(TEXINFOS) $(EXTRA_DIST) top_distdir = .. distdir = $(top_distdir)/$(PACKAGE)-$(VERSION) distdir: $(DISTFILES) @srcdirstrip=`echo "$(srcdir)" | sed 's|.|.|g'`; \ topsrcdirstrip=`echo "$(top_srcdir)" | sed 's|.|.|g'`; \ list='$(DISTFILES)'; for file in $$list; do \ case $$file in \ $(srcdir)/*) file=`echo "$$file" | sed "s|^$$srcdirstrip/||"`;; \ $(top_srcdir)/*) file=`echo "$$file" | sed "s|^$$topsrcdirstrip/|$(top_builddir)/|"`;; \ esac; \ if test -f $$file || test -d $$file; then d=.; else d=$(srcdir); fi; \ dir=`echo "$$file" | sed -e 's,/[^/]*$$,,'`; \ if test "$$dir" != "$$file" && test "$$dir" != "."; then \ dir="/$$dir"; \ $(mkinstalldirs) "$(distdir)$$dir"; \ else \ dir=''; \ fi; \ if test -d $$d/$$file; then \ if test -d $(srcdir)/$$file && test $$d != $(srcdir); then \ cp -pR $(srcdir)/$$file $(distdir)$$dir || exit 1; \ fi; \ cp -pR $$d/$$file $(distdir)$$dir || exit 1; \ else \ test -f $(distdir)/$$file \ || cp -p $$d/$$file $(distdir)/$$file \ || exit 1; \ fi; \ done check-am: all-am check: check-am all-am: Makefile $(PROGRAMS) installdirs: $(mkinstalldirs) $(DESTDIR)$(bindir) install: install-am install-exec: install-exec-am install-data: install-data-am uninstall: uninstall-am install-am: all-am @$(MAKE) $(AM_MAKEFLAGS) install-exec-am install-data-am installcheck: installcheck-am install-strip: $(MAKE) $(AM_MAKEFLAGS) INSTALL_PROGRAM="$(INSTALL_STRIP_PROGRAM)" \ install_sh_PROGRAM="$(INSTALL_STRIP_PROGRAM)" INSTALL_STRIP_FLAG=-s \ `test -z '$(STRIP)' || \ echo "INSTALL_PROGRAM_ENV=STRIPPROG='$(STRIP)'"` install mostlyclean-generic: clean-generic: distclean-generic: -rm -f $(CONFIG_CLEAN_FILES) maintainer-clean-generic: @echo "This command is intended for maintainers to use" @echo "it deletes files that may require special tools to rebuild." clean: clean-am clean-am: clean-binPROGRAMS clean-generic clean-libtool mostlyclean-am distclean: distclean-am -rm -rf ./$(DEPDIR) -rm -f Makefile distclean-am: clean-am distclean-compile distclean-generic \ distclean-libtool distclean-tags dvi: dvi-am dvi-am: info: info-am info-am: install-data-am: install-exec-am: install-binPROGRAMS install-info: install-info-am install-man: installcheck-am: maintainer-clean: maintainer-clean-am -rm -rf ./$(DEPDIR) -rm -f Makefile maintainer-clean-am: distclean-am maintainer-clean-generic mostlyclean: mostlyclean-am mostlyclean-am: mostlyclean-compile mostlyclean-generic \ mostlyclean-libtool pdf: pdf-am pdf-am: ps: ps-am ps-am: uninstall-am: uninstall-binPROGRAMS uninstall-info-am .PHONY: CTAGS GTAGS all all-am check check-am clean clean-binPROGRAMS \ clean-generic clean-libtool ctags distclean distclean-compile \ distclean-generic distclean-libtool distclean-tags distdir dvi \ dvi-am info info-am install install-am install-binPROGRAMS \ install-data install-data-am install-exec install-exec-am \ install-info install-info-am install-man install-strip \ installcheck installcheck-am installdirs maintainer-clean \ maintainer-clean-generic mostlyclean mostlyclean-compile \ mostlyclean-generic mostlyclean-libtool pdf pdf-am ps ps-am \ tags uninstall uninstall-am uninstall-binPROGRAMS \ uninstall-info-am # Tell versions [3.59,3.63) of GNU make to not export all variables. # Otherwise a system limit (for SysV at least) may be exceeded. .NOEXPORT: