Exit tunnel data created using the 3v package

PDB file -> 3v -> EZD file -> MAPMAN -> CCP4 file -> PyMOL -> PNG file -> mencoder -> AVI file -> Quicktime -> MOV file

Please reference the following paper:

NR Voss, MB Gerstein, TA Steitz, PB Moore
The Geometry of the Ribosomal Polypeptide Exit Tunnel.
J Mol. Biol. v360(4): 2006, pp 893-906.
download:  pre-print pdf[2.8 MB]   link  

Movies

• The Exit Tunnel
  • Movie of the Exit Tunnel as a function of probe radius with rotations (2006)
    download:  Xvid AVI file[3.4 MB]   Quicktime MOV file[7.0 MB]  
  • BETTER Movie of the Exit Tunnel as a function of probe radius (2006)
    download:  Xvid AVI file[2.0 MB]  
  • Movie of the Exit Tunnel as a function of probe radius (2006)
    download:  Xvid AVI file[484k]   Quicktime MP4 file[1.5 MB]  
  • Movie of the Exit Tunnel at 3.0 Å rotated around (2005)
    download:  Xvid AVI file[2.7 MB]   Quicktime MOV file[1.8 MB]  
  • Movie of the Exit Tunnel with α-helix and IgG domain inside (2005)
    download:   Xvid AVI file[5.0 MB]   Quicktime MOV file[12 MB]  
  • Movie of the Exit Tunnel at 3.0 Å rotated around with Azithroymcin (2005)
    download:  Quicktime MOV file[1.5 MB]  
  • Movie of the Exit Tunnel at 3.0 Å AND the L22 deletion mutant rotated around (2005)
    download:  Xvid AVI file[3.1 MB]   Quicktime MOV file[3.8 MB]  
• The 50S Large Ribosomal Subunit
  • Movie of the Cavities in the Large Ribosomal subunit (2006)
    download:  Xvid AVI file[1.7 MB]   Xvid AVI file[8.6 MB]   Quicktime MOV file[16 MB]  
  • Movie of the Surface of the Large Ribosomal subunit as probe radius increases (2006)
    download:  Xvid AVI file[3.5 MB]   Quicktime MOV file[6.2 MB]